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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26220708_26221122_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26220708 - 26221122

Intron Length:

415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

TCCTATTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

GCTAACTGAAAT

Flanking Amino Acid:

LWHTGNTPGQVRTLWHDPRH

Intron Amino Acid Position:

1047

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

73.3

36.4

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

80.8

0.69

0.8

76.4

31.8

Minor 5ss

30.8

-2.2

3.3

41.8

Minor BPS

48.3

-0

1.8

65.37

Associated Gene:

Gene:

THBS1

Ensembl Gene ID:

ENSAPLG00000003908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033628

26208927 - 26223145

14219

ENSAPLT00000004064

26208927 - 26222145

13219