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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26296340_26300983_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26296340 - 26300983

Intron Length:

4644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TATCTTTCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

TTTTCCTTATCT

Flanking Amino Acid:

EDGSELQDLEDDESVWLAPG

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

79.4

28.9

Major BPS

73.5

0.58

79.3

29.4

Major PPT

73.7

0.53

0.9

70.5

34.6

Minor 5ss

38.1

-1.3

3.1

48.5

47.7

Minor BPS

85.6

1.19

1.4

100.1

28.3

Associated Gene:

Gene:

FSIP1

Ensembl Gene ID:

ENSAPLG00000003851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003943

26252038 - 26312075

60038

ENSAPLT00000022757

26280553 - 26312075

31523

ENSAPLT00000019936

26278676 - 26312075

33400