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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2632297_2635062_F

Intron Information:

Intron Rank:

137858

Intron Class:

major

Intron Phase:

Intron Coordinates:

2632297 - 2635062

Intron Length:

2766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

TTTTCTGGAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.9

31.3

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

85.7

0.8

0.7

80.5

24.8

Minor 5ss

37.8

-1.4

3.3

55.2

42.1

Minor BPS

59.9

0.29

2.1

79.01

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043443

2582740 - 2635080

52341