Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_26365673_26366042_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26365673 - 26366042

Intron Length:

370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTACGTGTT

5'SS Class:

major

3'SS Sequence:

GGGTTGCTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAA

U12 Branch Point Sequence:

GTTCTTTGAACA

Flanking Amino Acid:

LPADFQDFLEKCVCLEDKER

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

79.2

34.9

Major BPS

74.8

0.62

39.8

Major PPT

61.7

0.26

1.1

54.6

44.8

Minor 5ss

39.3

-1.2

3.6

57.6

41.4

Minor BPS

61.1

0.34

1.4

70.24

35.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003298

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003402

26359192 - 26391351

32160