Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_26378191_26378746_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26378191 - 26378746

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGATTCT

5'SS Class:

major

3'SS Sequence:

CCCCCTTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTCCCC

Flanking Amino Acid:

EIIQEFPVLQERNYSIYLNH

Intron Amino Acid Position:

979

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

74.7

36.3

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

67.6

0.4

0.9

32.1

Minor 5ss

40.8

-1

3.2

45.7

Minor BPS

44.1

-0.4

3.6

72.92

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003298

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003402

26359192 - 26391351

32160