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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26379661_26380180_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26379661 - 26380180

Intron Length:

520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTTTGCTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATTTTATTT

Flanking Amino Acid:

FCNLSLSSNSLSRLYKFIEQ

Intron Amino Acid Position:

1040

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

34.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.8

0.83

0.7

85.5

29.2

Minor 5ss

39.4

-1.2

2.9

52.2

44.4

Minor BPS

61.8

0.45

1.6

79.69

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003298

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003402

26359192 - 26391351

32160