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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26387269_26388390_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26387269 - 26388390

Intron Length:

1122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACACACA

5'SS Class:

major

3'SS Sequence:

CTTTTGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TGTATTTTATTT

Flanking Amino Acid:

ASARRRQEVQVQTRLQTFIS

Intron Amino Acid Position:

1340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

65.1

40.8

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

79.1

0.66

76.3

37.7

Minor 5ss

37.9

-1.4

3.1

49.9

46.1

Minor BPS

55.9

0.26

1.6

72.59

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003298

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003402

26359192 - 26391351

32160