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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26388924_26390005_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26388924 - 26390005

Intron Length:

1082

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TGCTGTTTTACA

Flanking Amino Acid:

ETVIHFLLLEFDGDRQAFDA

Intron Amino Acid Position:

1378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

Major BPS

68.8

0.47

1.2

63.4

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

-1

2.9

56.9

47.4

Minor BPS

49.3

-0

2.1

63.48

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003298

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003402

26359192 - 26391351

32160