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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26453829_26467059_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26453829 - 26467059

Intron Length:

13231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGGTGT

5'SS Class:

major

3'SS Sequence:

TTCTTCTCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TTTGTTTCAACT

Flanking Amino Acid:

DQFHRLHIQRHQQNRNQVWW

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

61.3

45.8

Major BPS

74.5

0.61

79.6

29.1

Major PPT

0.88

0.6

24.2

Minor 5ss

36.6

-1.5

3.6

46.4

Minor BPS

64.9

0.55

1.6

83.3

38.2

Associated Gene:

Gene:

BMF

Ensembl Gene ID:

ENSAPLG00000003169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003220

26453727 - 26469573

15847