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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26468488_26469413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

26468488 - 26469413

Intron Length:

926

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGTC

5'SS Class:

major

3'SS Sequence:

CCCTTTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

GTTTCCTCAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

73.3

36.4

Major BPS

73.1

0.58

73.8

32.3

Major PPT

81.7

0.71

0.8

76.4

30.6

Minor 5ss

40.5

-1.1

3.5

45.7

Minor BPS

71.3

0.75

1.6

87.05

37.8

Associated Gene:

Gene:

BMF

Ensembl Gene ID:

ENSAPLG00000003169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003220

26453727 - 26469573

15847