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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26532579_26538015_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

26532579 - 26538015

Intron Length:

5437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTATGCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

ACCTACTAAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

0.54

0.9

73.9

35.7

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

52.6

0.08

1.9

62.3

43.9

Associated Gene:

Gene:

GPHN

Ensembl Gene ID:

ENSAPLG00000002496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023331

26479665 - 26825280

345616