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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26538140_26627384_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26538140 - 26627384

Intron Length:

89245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAGAA

5'SS Class:

major

3'SS Sequence:

CTATTTTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATT

Flanking Amino Acid:

MNSKQSLPKPVSDSCFRNLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

62.4

38.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.3

0.79

0.7

84.8

29.8

Minor 5ss

34.2

-1.8

3.6

48.4

Minor BPS

74.3

0.84

1.2

86.64

33.8

Associated Gene:

Gene:

GPHN

Ensembl Gene ID:

ENSAPLG00000002496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042678

26538019 - 26825097

287079

ENSAPLT00000023331

26479665 - 26825280

345616