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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26567735_26627384_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

26567735 - 26627384

Intron Length:

59650

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAATGCTT

5'SS Class:

major

3'SS Sequence:

CTATTTTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

41.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.3

0.79

0.7

84.8

29.8

Minor 5ss

38.5

-1.3

3.5

56.9

41.7

Minor BPS

74.3

0.84

1.2

86.64

33.8

Associated Gene:

Gene:

GPHN

Ensembl Gene ID:

ENSAPLG00000002496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002583

26567734 - 26825097

257364