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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26627464_26656946_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26627464 - 26656946

Intron Length:

29483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

CTCCCAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TTTTTGAGAATA

Flanking Amino Acid:

TLKIWSKTLLCWVGLYLHTR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

76.1

32.8

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

74.1

0.54

0.9

Minor 5ss

37.4

-1.4

2.9

51.7

39.2

Minor BPS

46.6

-0.2

2.3

68.62

Associated Gene:

Gene:

GPHN

Ensembl Gene ID:

ENSAPLG00000002496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045691

26627385 - 26825280

197896

ENSAPLT00000042678

26538019 - 26825097

287079

ENSAPLT00000023331

26479665 - 26825280

345616

ENSAPLT00000002583

26567734 - 26825097

257364