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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26657005_26678520_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

26657005 - 26678520

Intron Length:

21516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTAT

5'SS Class:

major

3'SS Sequence:

GAATCTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TCTTTCTGAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

69.1

Major BPS

82.1

0.8

71.6

36.4

Major PPT

74.5

0.55

0.9

70.2

40.8

Minor 5ss

36.7

-1.5

3.6

55.1

49.1

Minor BPS

0.57

1.4

74.51

36.5

Associated Gene:

Gene:

GPHN

Ensembl Gene ID:

ENSAPLG00000002496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045691

26627385 - 26825280

197896