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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26657005_26685800_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26657005 - 26685800

Intron Length:

28796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTAT

5'SS Class:

major

3'SS Sequence:

TGTTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TACTTGTTAGAT

Flanking Amino Acid:

R*CQTK*KKSRRR**IGVTK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

69.1

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

87.5

0.84

0.7

85.1

29.7

Minor 5ss

36.7

-1.5

3.6

55.1

49.1

Minor BPS

45.7

-0.2

2.3

65.75

44.7

Associated Gene:

Gene:

GPHN

Ensembl Gene ID:

ENSAPLG00000002496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042678

26538019 - 26825097

287079

ENSAPLT00000023331

26479665 - 26825280

345616

ENSAPLT00000002583

26567734 - 26825097

257364