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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26724619_26730357_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26724619 - 26730357

Intron Length:

5739

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TATTTTTTGACC

Flanking Amino Acid:

AITQQAVQENRFQIPSSLVV

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

67.2

39.4

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

80.6

0.69

0.9

85.9

25.7

Minor 5ss

38.8

-1.3

3.1

51.6

45.1

Minor BPS

73.6

0.73

1.1

77.76

31.6

Associated Gene:

Gene:

GPHN

Ensembl Gene ID:

ENSAPLG00000002496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045691

26627385 - 26825280

197896

ENSAPLT00000042678

26538019 - 26825097

287079

ENSAPLT00000023331

26479665 - 26825280

345616

ENSAPLT00000002583

26567734 - 26825097

257364