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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26785796_26788633_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26785796 - 26788633

Intron Length:

2838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAACT

5'SS Class:

strong_major

3'SS Sequence:

TCCATCTTAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TCCATCTTAACA

Flanking Amino Acid:

HL*KMAMLSELLMAQGIDSS

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

80.5

31.7

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

73.6

0.53

0.9

68.9

35.8

Minor 5ss

35.5

-1.7

3.1

50.2

45.8

Minor BPS

69.7

0.62

1.3

71.25

41.2

Associated Gene:

Gene:

GPHN

Ensembl Gene ID:

ENSAPLG00000002496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002583

26567734 - 26825097

257364

ENSAPLT00000045691

26627385 - 26825280

197896

ENSAPLT00000042678

26538019 - 26825097

287079

ENSAPLT00000034047

26685321 - 26825097

139777

ENSAPLT00000023331

26479665 - 26825280

345616