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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26794341_26798921_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26794341 - 26798921

Intron Length:

4581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTCAC

5'SS Class:

major

3'SS Sequence:

TTTGTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAGAT

U12 Branch Point Sequence:

TTGTTTTTAAAG

Flanking Amino Acid:

KIQNSSGNQMMVLKN*RFES

Intron Amino Acid Position:

453

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

70.4

35.5

Major BPS

74.1

0.6

38.9

Major PPT

80.8

0.69

82.2

33.3

Minor 5ss

31.5

-2.1

2.9

40.1

38.9

Minor BPS

65.9

0.36

1.4

67.73

40.3

Associated Gene:

Gene:

GPHN

Ensembl Gene ID:

ENSAPLG00000002496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034047

26685321 - 26825097

139777

ENSAPLT00000023331

26479665 - 26825280

345616

ENSAPLT00000045691

26627385 - 26825280

197896

ENSAPLT00000002583

26567734 - 26825097

257364

ENSAPLT00000042678

26538019 - 26825097

287079