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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26798981_26799198_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26798981 - 26799198

Intron Length:

218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTAAA

5'SS Class:

major

3'SS Sequence:

CTACAATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

TTTTCCTTACAT

Flanking Amino Acid:

WCKLDQDKISGL*DMTLKEV

Intron Amino Acid Position:

473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

1.3

75.9

35.2

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

74.1

0.54

0.9

69.8

Minor 5ss

36.5

-1.5

2.5

42.3

44.5

Minor BPS

75.8

0.89

1.7

93.4

34.6

Associated Gene:

Gene:

GPHN

Ensembl Gene ID:

ENSAPLG00000002496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042678

26538019 - 26825097

287079

ENSAPLT00000034047

26685321 - 26825097

139777

ENSAPLT00000023331

26479665 - 26825280

345616

ENSAPLT00000002583

26567734 - 26825097

257364

ENSAPLT00000045691

26627385 - 26825280

197896