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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26800275_26807569_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26800275 - 26807569

Intron Length:

7295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTACCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

CTTCCTTTACCC

Flanking Amino Acid:

PTINLGIVGDKKPDVFKEEG

Intron Amino Acid Position:

594

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.6

29.9

Major BPS

84.7

0.86

74.3

40.7

Major PPT

76.7

0.6

0.8

73.8

30.1

Minor 5ss

38.7

-1.3

2.7

47.6

34.4

Minor BPS

62.2

0.36

1.7

71.26

40.4

Associated Gene:

Gene:

GPHN

Ensembl Gene ID:

ENSAPLG00000002496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042678

26538019 - 26825097

287079