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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26817679_26819755_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26817679 - 26819755

Intron Length:

2077

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCTAA

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

LHQEAYLWGKRTILNRCWIL

Intron Amino Acid Position:

594

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

72.9

34.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.2

0.46

1.1

66.7

42.9

Minor 5ss

49.2

-0

2.5

63.9

47.7

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

GPHN

Ensembl Gene ID:

ENSAPLG00000002496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034047

26685321 - 26825097

139777

ENSAPLT00000023331

26479665 - 26825280

345616

ENSAPLT00000002583

26567734 - 26825097

257364

ENSAPLT00000045691

26627385 - 26825280

197896

ENSAPLT00000042678

26538019 - 26825097

287079