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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26819830_26821044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26819830 - 26821044

Intron Length:

1215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTCCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAA

U12 Branch Point Sequence:

AGATCATAAATA

Flanking Amino Acid:

FTLAEFL*NQACQQLLQLWI

Intron Amino Acid Position:

619

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

80.7

33.7

Major BPS

0.4

1.1

66.5

36.3

Major PPT

79.3

0.66

0.7

75.8

26.5

Minor 5ss

34.7

-1.7

41.3

44.8

Minor BPS

49.4

-0

1.9

60.85

38.9

Associated Gene:

Gene:

GPHN

Ensembl Gene ID:

ENSAPLG00000002496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002583

26567734 - 26825097

257364

ENSAPLT00000045691

26627385 - 26825280

197896

ENSAPLT00000042678

26538019 - 26825097

287079

ENSAPLT00000034047

26685321 - 26825097

139777

ENSAPLT00000023331

26479665 - 26825280

345616