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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26821110_26822333_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26821110 - 26822333

Intron Length:

1224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTAACCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

TGTTCTTTAACC

Flanking Amino Acid:

A*EK*SLRSQAILCQLLSPA

Intron Amino Acid Position:

641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

33.2

Major BPS

74.7

0.61

65.9

40.9

Major PPT

77.7

0.62

0.9

70.1

35.2

Minor 5ss

39.7

-1.2

3.1

56.6

47.5

Minor BPS

85.6

1.1

0.9

87.16

29.3

Associated Gene:

Gene:

GPHN

Ensembl Gene ID:

ENSAPLG00000002496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034047

26685321 - 26825097

139777

ENSAPLT00000023331

26479665 - 26825280

345616

ENSAPLT00000002583

26567734 - 26825097

257364

ENSAPLT00000045691

26627385 - 26825280

197896

ENSAPLT00000042678

26538019 - 26825097

287079