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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26822438_26823674_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26822438 - 26823674

Intron Length:

1237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

GCTGCTTCTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ACATTTTCATCC

Flanking Amino Acid:

WILGPPLSKPGYHVM*NWTP

Intron Amino Acid Position:

675

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

69.9

41.1

Major BPS

100

1.24

0.5

100

Major PPT

75.8

0.58

0.9

68.4

37.5

Minor 5ss

33.4

-1.9

2.9

35.8

40.7

Minor BPS

46.4

-0.2

1.7

38.9

Associated Gene:

Gene:

GPHN

Ensembl Gene ID:

ENSAPLG00000002496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034047

26685321 - 26825097

139777

ENSAPLT00000023331

26479665 - 26825280

345616

ENSAPLT00000002583

26567734 - 26825097

257364

ENSAPLT00000045691

26627385 - 26825280

197896

ENSAPLT00000042678

26538019 - 26825097

287079