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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26837291_26838793_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26837291 - 26838793

Intron Length:

1503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

CATTGTTGAATT

Flanking Amino Acid:

APVFESKFVQVNRRGETMNI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

0.65

1.1

77.4

37.3

Major PPT

76.1

0.59

73.4

41.9

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

0.11

1.9

69.43

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002501

26834351 - 26839886

5536