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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2685544_2689005_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2685544 - 2689005

Intron Length:

3462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

TTTGTGTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

TGTACCGTAGCT

Flanking Amino Acid:

ARDDGAGQGGRDLFSPPLSG

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

64.1

41.8

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

80.8

0.69

0.9

72.8

42.2

Minor 5ss

32.1

-2

3.4

43.3

44.5

Minor BPS

51.6

0.13

2.3

77.8

44.1

Associated Gene:

Gene:

LMO1

Ensembl Gene ID:

ENSAPLG00000029620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035747

2685035 - 2741505

56471