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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26890701_26893025_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26890701 - 26893025

Intron Length:

2325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTATGTTAATC

Flanking Amino Acid:

KDVNEVFDLLADMHGTLTFV

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

67.5

40.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

90.1

0.9

0.6

Minor 5ss

34.3

-1.8

2.8

37.3

42.5

Minor BPS

53.2

0.08

2.1

67.23

38.7

Associated Gene:

Gene:

MPP5

Ensembl Gene ID:

ENSAPLG00000000613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036235

26878953 - 26903013

24061

ENSAPLT00000000929

26878953 - 26904125

25173