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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2689108_2725973_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2689108 - 2725973

Intron Length:

36866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGTGGG

5'SS Class:

major

3'SS Sequence:

GTTGGTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

TATTGTCTAACG

Flanking Amino Acid:

MMVLDKEDGVPMLSVQPK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

58.3

46.6

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

72.8

0.51

1.1

65.2

45.5

Minor 5ss

31.2

-2.2

3.4

46.1

Minor BPS

51.3

-0.1

2.1

65.12

42.7

Associated Gene:

Gene:

LMO1

Ensembl Gene ID:

ENSAPLG00000029620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038503

2688552 - 2741505

52954

ENSAPLT00000017925

2687866 - 2741505

53640