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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2689108_2735913_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2689108 - 2735913

Intron Length:

46806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGTGGG

5'SS Class:

major

3'SS Sequence:

GCTTCTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTTCTAATGATT

Flanking Amino Acid:

CRDDGAGQGGRLFGTTGNCA

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

58.3

46.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

75.7

0.58

72.4

37.7

Minor 5ss

31.2

-2.2

3.4

46.1

Minor BPS

45.8

-0.2

1.8

66.1

38.6

Associated Gene:

Gene:

LMO1

Ensembl Gene ID:

ENSAPLG00000029620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035747

2685035 - 2741505

56471