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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26896363_26897031_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26896363 - 26897031

Intron Length:

669

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTGTCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

TTTTCTGTCAAG

Flanking Amino Acid:

KVLYNANKNDDYDNEEILTY

Intron Amino Acid Position:

457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.8

83.2

28.5

Major BPS

65.7

0.39

71.3

30.3

Major PPT

75.7

0.58

1.1

75.7

38.5

Minor 5ss

36.2

-1.6

2.7

42.6

38.5

Minor BPS

46.3

-0.4

2.5

63.96

44.2

Associated Gene:

Gene:

MPP5

Ensembl Gene ID:

ENSAPLG00000000613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036235

26878953 - 26903013

24061

ENSAPLT00000000929

26878953 - 26904125

25173