Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_26897200_26897926_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26897200 - 26897926

Intron Length:

727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTTTG

5'SS Class:

major

3'SS Sequence:

GCTTTTGTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATCAC

U12 Branch Point Sequence:

AGGTATATCACT

Flanking Amino Acid:

EVDRFASAVPHTTRSRRETE

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.3

70.1

43.1

Major BPS

69.5

0.49

71.8

33.3

Major PPT

77.7

0.62

0.9

72.9

37.4

Minor 5ss

45.7

-0.5

2.8

62.9

41.8

Minor BPS

43.4

-0.4

2.1

60.95

42.5

Associated Gene:

Gene:

MPP5

Ensembl Gene ID:

ENSAPLG00000000613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036235

26878953 - 26903013

24061

ENSAPLT00000000929

26878953 - 26904125

25173