Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_26908954_26909426_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26908954 - 26909426

Intron Length:

473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TTCTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTAGCAACAAAT

Flanking Amino Acid:

VFEHYQEGGDSYELTGLARG

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

74.8

35.3

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

95.9

1.03

0.5

95.6

15.1

Minor 5ss

38.2

-1.3

2.7

49.5

40.3

Minor BPS

42.8

-0.4

2.1

65.25

44.1

Associated Gene:

Gene:

ATP6V1D

Ensembl Gene ID:

ENSAPLG00000015308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015968

26906114 - 26915035

8922