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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26930633_26931952_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26930633 - 26931952

Intron Length:

1320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TAAGCCTCATTT

Flanking Amino Acid:

AFLHYYDPTKEENKPVGGFS

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

36.6

Major BPS

84.6

0.86

41.2

Major PPT

92.5

0.96

0.6

88.1

21.6

Minor 5ss

38.1

-1.3

3.1

48.2

47.9

Minor BPS

48.6

-0

1.9

66.36

44.3

Associated Gene:

Gene:

PLEK2

Ensembl Gene ID:

ENSAPLG00000014782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042432

26918036 - 26934344

16309