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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26936727_26939546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26936727 - 26939546

Intron Length:

2820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCACAT

U12 Branch Point Sequence:

ATCTACTGCACA

Flanking Amino Acid:

MTEKERCPKVEQYVGEIKG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

75.1

35.1

Major BPS

62.5

0.31

1.2

38.9

Major PPT

75.5

0.57

0.7

69.9

Minor 5ss

33.7

-1.9

3.2

40.4

Minor BPS

47.8

-0.1

2.1

63.71

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015335

26935182 - 26939894

4713