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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26947299_26948264_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
26947299 - 26948264

Intron Length:
966

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTTTGTTTT

5'SS Class:
major

3'SS Sequence:
TAATGTTTTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCTGAT

U12 Branch Point Sequence:
AATCTGATAATG

Flanking Amino Acid:
KFLVSKSTGRGSSEQLDTER

Intron Amino Acid Position:
73

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.7
0.68
1.1
81.7
32.3

Major BPS
82.5
0.81
0.8
71.4
36.6

Major PPT
76.2
0.59
0.9
74
41.1

Minor 5ss
48.6
-0.1
2.4
67.6
43.4

Minor BPS
42.6
-0.7
2.2
49.03
38.6

Associated Gene:

Gene:
ZFYVE26

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26944895 - 26985133
40239

26944895 - 26985133
40239