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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26948396_26949299_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
26948396 - 26949299

Intron Length:
904

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTATGGCCA

5'SS Class:
major

3'SS Sequence:
TTTTGTTTTCTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTGAA

U12 Branch Point Sequence:
GCATTTTGAAAA

Flanking Amino Acid:
SSKHFLEQILVTALTLLKRE

Intron Amino Acid Position:
117

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.1
0.52
1
57.6
41

Major BPS
87.2
0.92
0.8
77.7
37.1

Major PPT
87.7
0.85
0.7
81.2
36.5

Minor 5ss
37.3
-1.4
3.2
45
45

Minor BPS
48.8
-0
1.5
54.65
37.7

Associated Gene:

Gene:
ZFYVE26

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26944895 - 26985133
40239

26944895 - 26985133
40239