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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26949465_26950671_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
26949465 - 26950671

Intron Length:
1207

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGCCAGC

5'SS Class:
major

3'SS Sequence:
TCTTTCCATTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTAAA

U12 Branch Point Sequence:
TTTGTTGTAAAG

Flanking Amino Acid:
ALLWTLHKTQDLCNDSVLKD

Intron Amino Acid Position:
172

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.6
0.37
1.3
58
47.1

Major BPS
75.2
0.63
1.1
75.9
36.3

Major PPT
79.4
0.66
0.8
78.5
29.2

Minor 5ss
43.9
-0.7
3
60.7
44

Minor BPS
46.8
-0.3
2.2
59.29
43.1

Associated Gene:

Gene:
ZFYVE26

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26944895 - 26985133
40239

26944895 - 26985133
40239