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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26951202_26954019_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
26951202 - 26954019

Intron Length:
2818

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTAAATGCG

5'SS Class:
major

3'SS Sequence:
TTTTCTTCCACAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTTAA

U12 Branch Point Sequence:
TTTTCTTCCACA

Flanking Amino Acid:
KVPARDQQLQAAPLPNTLSQ

Intron Amino Acid Position:
255

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75
0.59
1.1
63
41.8

Major BPS
82.2
0.8
0.8
71.9
35.8

Major PPT
88.2
0.86
0.6
84.1
24.1

Minor 5ss
31.9
-2.1
3.2
32.8
42.1

Minor BPS
61.7
0.36
2
79.34
37.2

Associated Gene:

Gene:
ZFYVE26

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26944895 - 26985133
40239

26944895 - 26985133
40239