Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_26955454_26955547_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26955454 - 26955547

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTATTT

Flanking Amino Acid:

YKVVMSNRNAEHQLASSRRF

Intron Amino Acid Position:

536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

78.8

38.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.1

0.88

0.7

83.7

31.3

Minor 5ss

48.4

-0.1

3.2

72.7

44.5

Minor BPS

0.58

1.5

81.3

34.9

Associated Gene:

Gene:

ZFYVE26

Ensembl Gene ID:

ENSAPLG00000014809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044763

26944895 - 26985133

40239

ENSAPLT00000015469

26944895 - 26985133

40239