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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26959549_26959849_F


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
26959549 - 26959849

Intron Length:
301

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGTATGC

5'SS Class:
major

3'SS Sequence:
TCCTTCTTTGTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTGTTAT

U12 Branch Point Sequence:
TTTGTTATAGTT

Flanking Amino Acid:
SCTSQGQSKSEISDEKMGSY

Intron Amino Acid Position:
834

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.9
0.47
1.1
59.7
40.5

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
84.2
0.77
0.7
80.4
25

Minor 5ss
37
-1.5
3.3
50.9
45.6

Minor BPS
48.1
-0
1.9
71.74
40.2

Associated Gene:

Gene:
ZFYVE26

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26944895 - 26985133
40239

26944895 - 26985133
40239