Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_26978595_26979308_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26978595 - 26979308

Intron Length:

714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGGTC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TCTGTTTTAACA

Flanking Amino Acid:

ESTVKPVLIAQDDDYFATLR

Intron Amino Acid Position:

1915

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

72.8

38.7

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

80.3

0.68

0.9

76.7

36.2

Minor 5ss

34.3

-1.8

3.7

50.6

46.1

Minor BPS

69.5

0.61

1.3

73.92

38.7

Associated Gene:

Gene:

ZFYVE26

Ensembl Gene ID:

ENSAPLG00000014809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044763

26944895 - 26985133

40239

ENSAPLT00000015469

26944895 - 26985133

40239