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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26981147_26981935_F


Intron Information:

Intron Rank:
35

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
26981147 - 26981935

Intron Length:
789

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATGTATA

5'SS Class:
strong_major

3'SS Sequence:
TTTTCTTGCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCAAAA

U12 Branch Point Sequence:
TTTTTCTTGCCT

Flanking Amino Acid:
RKKMSAADVSRHINTVDLQM

Intron Amino Acid Position:
2121

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
90.9
0.96
0.8
88.8
25

Major BPS
68.1
0.45
1
73.5
28.6

Major PPT
78.2
0.64
0.8
73.3
37.1

Minor 5ss
45.4
-0.5
2.5
59.5
45.1

Minor BPS
52.8
0.17
3.5
90.53
33.5

Associated Gene:

Gene:
ZFYVE26

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26944895 - 26985133
40239

26944895 - 26985133
40239