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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26983899_26984923_F


Intron Information:

Intron Rank:
39

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
26983899 - 26984923

Intron Length:
1025

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACGTATA

5'SS Class:
strong_major

3'SS Sequence:
TTTTCTGCTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTAAC

U12 Branch Point Sequence:
AGTTTTCTAACT

Flanking Amino Acid:
IQDMDSDENKIQAYLMCNKL

Intron Amino Acid Position:
2265

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.3
0.93
0.9
87.3
29.4

Major BPS
84.6
0.86
0.8
83.9
22.3

Major PPT
86.9
0.83
0.8
85.2
29.6

Minor 5ss
38.2
-1.3
3
51
45.5

Minor BPS
62.9
0.48
1.6
79.48
36.2

Associated Gene:

Gene:
ZFYVE26

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26944895 - 26985133
40239

26944895 - 26985133
40239