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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26993801_26993945_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26993801 - 26993945

Intron Length:

145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGGGGAC

U12 Branch Point Sequence:

CTGCGGGGACCT

Flanking Amino Acid:

KETARELARRGARVIIACRD

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

37.7

-0.7

1.3

23.9

34.6

Major PPT

83.1

0.75

0.8

31.7

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

28.2

-1.5

2.6

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015195

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015860

26988029 - 26994270

6242