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Intron Name: Anas_platyrhynchos_platyrhynchos_5_26994746_26997310_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26994746 - 26997310

Intron Length:

2565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGGGTGCT

5'SS Class:

major

3'SS Sequence:

TTTTCTTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

TTTTCTTCCACA

Flanking Amino Acid:

AAQRLRHGAAEEKKKLVREF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

66.2

39.6

Major BPS

63.7

0.34

1.2

41.8

Major PPT

88.2

0.86

0.6

84.1

24.1

Minor 5ss

-2.4

3.4

41.3

45.2

Minor BPS

61.7

0.36

79.34

37.2

Associated Gene:

Gene:

VTI1B

Ensembl Gene ID:

ENSAPLG00000029959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043122

26994631 - 27002564

7934