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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27005527_27005660_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
27005527 - 27005660

Intron Length:
134

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATA|GTAAGCTGA

5'SS Class:
major

3'SS Sequence:
TCTATTCTAACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTTTTTAATT

Flanking Amino Acid:
IGLRDVDPAEYYILKNYDIH

Intron Amino Acid Position:
209

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.7
0.49
1.1
61.4
40.1

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
77.8
0.63
0.9
73.5
35.7

Minor 5ss
45.1
-0.5
2.8
57.1
42.8

Minor BPS
84.9
1.17
0.8
94.97
24.6

Associated Gene:

Gene:
ARG2

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

27002769 - 27021540
18772