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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27020063_27022919_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27020063 - 27022919

Intron Length:

2857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTATTCACC

5'SS Class:

weak_major

3'SS Sequence:

CCCTAGCGTGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTGCAG

U12 Branch Point Sequence:

GCCCCCCTAGCG

Flanking Amino Acid:

MEERPFRSASGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.2

0.27

1.1

39.3

Major BPS

38.5

-0.7

1.7

47.8

Major PPT

46.9

-0.1

1.7

49.1

Minor 5ss

48.5

-0.1

2.4

36.4

Minor BPS

44.6

-0.5

46.42

45.7

Associated Gene:

Gene:

PIGH

Ensembl Gene ID:

ENSAPLG00000001006

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001005

27020057 - 27029352

9296