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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27024902_27027017_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27024902 - 27027017

Intron Length:

2116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATCAGT

5'SS Class:

major

3'SS Sequence:

GTTTGTCTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAA

U12 Branch Point Sequence:

CAAACTTCAATT

Flanking Amino Acid:

DVVINEAIYMQKVIYYLCIL

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

67.3

43.6

Major BPS

69.4

0.48

71.6

33.8

Major PPT

79.4

0.66

0.8

73.9

36.8

Minor 5ss

41.3

-1

2.9

55.2

43.9

Minor BPS

50.6

0.1

1.6

62.99

41.3

Associated Gene:

Gene:

PIGH

Ensembl Gene ID:

ENSAPLG00000001006

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001005

27020057 - 27029352

9296