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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27036986_27038617_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27036986 - 27038617

Intron Length:

1632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGGA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTAAATTTAACA

Flanking Amino Acid:

LFGTKMFAAKPILPSSLEDC

Intron Amino Acid Position:

1176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.4

39.5

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

84.8

0.78

0.8

37.3

Minor 5ss

37.6

-1.4

3.2

49.9

46.3

Minor BPS

65.6

0.49

1.5

74.26

36.8

Associated Gene:

Gene:

PLEKHH1

Ensembl Gene ID:

ENSAPLG00000001036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001179

27035730 - 27060673

24944